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vapC10 ribonuclease VapC10 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 886736, updated on 6-Oct-2023
Gene symbol
vapC10
Gene description
ribonuclease VapC10
Locus tag
Rv1397c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Sequence:
NC_000962.3 (1574112..1574513, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene HTH-type transcriptional regulator Neighboring gene PE-PGRS family protein PE_PGRS25 Neighboring gene antitoxin VapB10 Neighboring gene carboxylesterase NlhH Neighboring gene lipase

Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
ribonuclease VapC10
NP_215913.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv1398c, contains PIN domain. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    1574112..1574513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215913.1 ribonuclease VapC10 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215913.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I7W6G2
    Conserved Domains (1) summary
    cd18741
    Location:3 → 123
    PIN_VapC4-5_FitB-like; uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFA7.1

Gene LinkOut

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Molecular Biology Databases
Research Materials