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Rv2424c transposase [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 885699, updated on 12-Feb-2021

Summary

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Gene symbol
Rv2424c
Gene description
transposase
Locus tag
Rv2424c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (2720776..2721777, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary Trends of the Transposase-Encoding Open Reading Frames A and B (orfA and orfB) of the Mycobacterial IS6110 Insertion Sequence. Thabet S, et al. PLoS One, 2015. PMID 26087177, Free PMC Article
  2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The study determines the genetic variability of the IS6110 Insertion Sequence transposase-encoding Open Reading Frames and determines the selective pressures acting on their coding sequences.
    Title: Evolutionary Trends of the Transposase-Encoding Open Reading Frames A and B (orfA and orfB) of the Mycobacterial IS6110 Insertion Sequence.
Submit: New GeneRIF Correction

General gene information

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Homology

mobile_element

  • Loc: c2721777-2720779 mobile_element_type = insertion sequence:IS1558-2

General protein information

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Preferred Names
transposase
NP_216940.1
  • Probable transposase for IS1558

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    2720776..2721777 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_216940.1 transposase [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_216940.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    P71924
    Conserved Domains (1) summary
    NF033542
    Location:12 → 294
    transpos_IS110; IS110 family transposase
Nucleotide Protein
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