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NAEGRDRAFT_77247 alanine aminotransferase [ Naegleria gruberi ]

Gene ID: 8852398, updated on 30-Nov-2023

Summary

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Gene symbol
NAEGRDRAFT_77247
Gene description
alanine aminotransferase
Locus tag
NAEGRDRAFT_77247
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Naegleria gruberi (strain: NEG-M)
Lineage
Eukaryota; Discoba; Heterolobosea; Tetramitia; Eutetramitia; Vahlkampfiidae; Naegleria
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Genomic context

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Location:
chromosome: Unknown
Exon count:
2

NW_003163321.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ras family small GTPase Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003163321.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Fritz-Laylin LK, et al. Cell, 2010 Mar 5. PMID 20211133

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine aminotransferase
XP_002681562.1
  • similar to COG3977

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003163321.1 Reference assembly

    Range
    675443..677183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002681516.1 → XP_002681562.1  alanine aminotransferase [Naegleria gruberi]

    See identical proteins and their annotated locations for XP_002681562.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D2V3R0
    Conserved Domains (2) summary
    cd00609
    Location:104 → 482
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:5 → 492
    PTZ00377; alanine aminotransferase; Provisional
Nucleotide Protein
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