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rpoH RNA polymerase sigma factor RpoH [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 883126, updated on 11-Sep-2024

Summary

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Gene symbol
rpoH
Gene description
RNA polymerase sigma factor RpoH
Locus tag
PA0376
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (420683..421537)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene signal recognition particle receptor FtsY Neighboring gene cell division protein FtsE Neighboring gene cell division protein FtsX Neighboring gene hypothetical protein Neighboring gene monofunctional biosynthetic peptidoglycan transglycosylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa. Benvenisti L, et al. Gene, 1995 Mar 21. PMID 7698670
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
RNA polymerase sigma factor RpoH
NP_249067.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    420683..421537
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_249067.1 RNA polymerase sigma factor RpoH [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_249067.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P42378
    Conserved Domains (1) summary
    PRK06596
    Location:1 → 284
    PRK06596; RNA polymerase factor sigma-32; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42378.2

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