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icd isocitrate dehydrogenase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 882329, updated on 26-Mar-2025

Summary

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Gene symbol
icd
Gene description
isocitrate dehydrogenase
Locus tag
PA2623
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (2965546..2966802, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene ATP-dependent Clp protease adapter protein Clp Neighboring gene cold-shock protein CspD Neighboring gene isocitrate dehydrogenase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure of a bacterial enzyme regulated by phosphorylation, isocitrate dehydrogenase. Hurley JH, et al. Proc Natl Acad Sci U S A, 1989 Nov. PMID 2682654, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables pyruvate dehydrogenase (acetyl-transferring) activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within amino acid metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within carbon utilization ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within generation of precursor metabolites and energy ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase
NP_251313.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    2965546..2966802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_251313.1 isocitrate dehydrogenase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_251313.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9I0L5
    Conserved Domains (1) summary
    PRK07006
    Location:9 → 418
    PRK07006; isocitrate dehydrogenase; Reviewed
Nucleotide Protein
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