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fliR flagellar biosynthesis protein FliR [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881861, updated on 24-Aug-2024

Summary

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Gene symbol
fliR
Gene description
flagellar biosynthesis protein FliR
Locus tag
PA1448
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (1575559..1576335)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene flagellar protein FliO Neighboring gene flagellar biosynthesis protein FliP Neighboring gene flagellar biosynthesis protein FliQ Neighboring gene flagellar biosynthesis protein FlhB Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization, nucleotide sequence, and expression of the fliO, fliP, fliQ, and fliR genes of Escherichia coli. Malakooti J, et al. J Bacteriol, 1994 Jan. PMID 8282695, Free PMC Article
  2. Components of the Salmonella flagellar export apparatus and classification of export substrates. Minamino T, et al. J Bacteriol, 1999 Mar. PMID 10049367, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within protein secretion ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in bacterial-type flagellum ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in membrane ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
flagellar biosynthesis protein FliR
NP_250139.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    1575559..1576335
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250139.1 flagellar biosynthesis protein FliR [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250139.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    PRK05701
    Location:9 → 250
    fliR; flagellar type III secretion system protein FliR
Nucleotide Protein
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