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arcB ornithine carbamoyltransferase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881792, updated on 24-Aug-2024

Summary

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Gene symbol
arcB
Gene description
ornithine carbamoyltransferase
Locus tag
PA5172
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5823716..5824726)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene arginine/ornithine antiporter Neighboring gene arginine deiminase Neighboring gene carbamate kinase Neighboring gene beta-ketoacyl synthase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas aeruginosa mutants affected in anaerobic growth on arginine: evidence for a four-gene cluster encoding the arginine deiminase pathway. Vander Wauven C, et al. J Bacteriol, 1984 Dec. PMID 6438064, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables ornithine carbamoyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within arginine deiminase pathway IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
ornithine carbamoyltransferase
NP_253859.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5823716..5824726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253859.1 ornithine carbamoyltransferase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253859.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    PRK02102
    Location:1 → 335
    PRK02102; ornithine carbamoyltransferase; Validated
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P08308.3

Gene LinkOut

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Molecular Biology Databases