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waaC heptosyltransferase I [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881533, updated on 24-Aug-2024
Gene symbol
waaC
Gene description
heptosyltransferase I
Locus tag
PA5011
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Sequence:
NC_002516.2 (5629786..5630853, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene lipopolysaccharide kinase WaaP Neighboring gene UDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG Neighboring gene heptosyltransferase II Neighboring gene branched-chain amino acid aminotransferase Neighboring gene bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase

Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Isolation and characterization of two genes, waaC (rfaC) and waaF (rfaF), involved in Pseudomonas aeruginosa serotype O5 inner-core biosynthesis. de Kievit TR, et al. J Bacteriol, 1997 Jun. PMID 9171387, Free PMC Article
  2. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics. Cantarel BL, et al. Nucleic Acids Res, 2009 Jan. PMID 18838391, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables lipid A-core heptosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within lipopolysaccharide core region biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Preferred Names
heptosyltransferase I
NP_253698.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5629786..5630853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253698.1 heptosyltransferase I [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253698.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    cl10013
    Location:1 → 296
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HUF5.1

Gene LinkOut

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Molecular Biology Databases