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phaD poly(3-hydroxyalkanoic acid) depolymerase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881171, updated on 24-Aug-2024

Summary

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Gene symbol
phaD
Gene description
poly(3-hydroxyalkanoic acid) depolymerase
Locus tag
PA5057
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (5697198..5698055)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene poly(3-hydroxyalkanoic acid) synthase Neighboring gene poly(3-hydroxyalkanoic acid) synthase Neighboring gene transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
poly(3-hydroxyalkanoic acid) depolymerase
NP_253744.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    5697198..5698055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253744.1 poly(3-hydroxyalkanoic acid) depolymerase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253744.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q6E2P2
    Conserved Domains (1) summary
    TIGR02240
    Location:4 → 279
    PHA_depoly_arom; poly(3-hydroxyalkanoate) depolymerase
Nucleotide Protein
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