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pdxB erythronate-4-phosphate dehydrogenase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881132, updated on 6-Oct-2023

Summary

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Gene symbol
pdxB
Gene description
erythronate-4-phosphate dehydrogenase
Locus tag
PA1375
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (1491913..1493055)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-ACP synthase Neighboring gene hypothetical protein Neighboring gene bifunctional isocitrate dehydrogenase kinase/phosphatase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables 4-phosphoerythronate dehydrogenase activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
enables NAD binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within pyridoxal phosphate biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within pyridoxine biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
erythronate-4-phosphate dehydrogenase
NP_250066.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    1491913..1493055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250066.1 erythronate-4-phosphate dehydrogenase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250066.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A367MG93
    Conserved Domains (1) summary
    PRK00257
    Location:1 → 380
    PRK00257; 4-phosphoerythronate dehydrogenase PdxB
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9I3W9.1

Gene LinkOut

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Molecular Biology Databases
Research Materials