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sodM superoxide dismutase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 881040, updated on 24-Aug-2024

Summary

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Gene symbol
sodM
Gene description
superoxide dismutase
Locus tag
PA4468
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4997439..4998050, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene phosphoryl carrier protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene fumarate hydratase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Effect of superoxide dismutase gene inactivation on virulence of Pseudomonas aeruginosa PAO1 toward the silkworm, Bombyx mori. Iiyama K, et al. Appl Environ Microbiol, 2007 Mar. PMID 17220257, Free PMC Article
  2. Antioxidant Defense Mechanisms in Pseudomonas aeruginosa: Role of Iron-Cofactored Superoxide Dismutase in Response to UV-C Radiations. Ghorbal SK, et al. Curr Microbiol, 2016 Aug. PMID 27094998
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Inactivation of sodM and/or sodB genes decreases the resistance of P. aeruginosa after exposure to UV-C rays.
    Title: Antioxidant Defense Mechanisms in Pseudomonas aeruginosa: Role of Iron-Cofactored Superoxide Dismutase in Response to UV-C Radiations.
  2. required for full virulence of P. aeruginosa against Bombyx mori; Fe-SOD is more important than Mn-SOD in the infection. process.
    Title: Effect of superoxide dismutase gene inactivation on virulence of Pseudomonas aeruginosa PAO1 toward the silkworm, Bombyx mori.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
superoxide dismutase
NP_253158.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4997439..4998050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_253158.1 superoxide dismutase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_253158.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A485GD81
    Conserved Domains (1) summary
    COG0605
    Location:1 → 203
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53652.2

Gene LinkOut

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Molecular Biology Databases