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ygbB 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880484, updated on 24-Aug-2024

Summary

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Gene symbol
ygbB
Gene description
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Locus tag
PA3627
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4062426..4062899, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene protein-L-isoaspartate O-methyltransferase Neighboring gene 5'-nucleotidase SurE Neighboring gene tRNA pseudouridine synthase D Neighboring gene esterase Neighboring gene alcohol dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
NP_252317.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4062426..4062899 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252317.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252317.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P57708
    Conserved Domains (1) summary
    pfam02542
    Location:1 → 154
    YgbB; YgbB family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P57708.1

Gene LinkOut

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