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bfiR protein BfiR [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880470, updated on 24-Aug-2024

Summary

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Gene symbol
bfiR
Gene description
protein BfiR
Locus tag
PA4196
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4693112..4693756, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene ABC transporter permease Neighboring gene ABC transporter permease Neighboring gene ABC transporter Neighboring gene protein BfiS Neighboring gene acyl-CoA synthetase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SagS contributes to the motile-sessile switch and acts in concert with BfiSR to enable Pseudomonas aeruginosa biofilm formation. Petrova OE, et al. J Bacteriol, 2011 Dec. PMID 21949078, Free PMC Article
  2. A novel signaling network essential for regulating Pseudomonas aeruginosa biofilm development. Petrova OE, et al. PLoS Pathog, 2009 Nov. PMID 19936057, Free PMC Article
  3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. SagS interacts directly with BfiS and indirectly with BfiR to enable biofilm formation.
    Title: SagS contributes to the motile-sessile switch and acts in concert with BfiSR to enable Pseudomonas aeruginosa biofilm formation.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables phosphorelay response regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
protein BfiR
NP_252885.1
  • Product name confidence: class 1: Function experimentally demonstrated in P. aeruginosa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4693112..4693756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252885.1 protein BfiR [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252885.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2R3IV54
    Conserved Domains (1) summary
    COG4566
    Location:3 → 204
    FixJ; Two-component response regulator, FixJ family, consists of REC and HTH domains [Signal transduction mechanisms, Transcription]
Nucleotide Protein
Heading Accession and Version

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