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metR transcriptional regulator MetR [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880220, updated on 24-Aug-2024

Summary

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Gene symbol
metR
Gene description
transcriptional regulator MetR
Locus tag
PA3587
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4019743..4020663)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene membrane protein GlpM Neighboring gene hydrolase Neighboring gene porin Neighboring gene acetyl-CoA acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Swarming of Pseudomonas aeruginosa is controlled by a broad spectrum of transcriptional regulators, including MetR. Yeung AT, et al. J Bacteriol, 2009 Sep. PMID 19592586, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator MetR
NP_252277.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4019743..4020663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252277.1 transcriptional regulator MetR [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252277.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q9HY39
    Conserved Domains (2) summary
    cd08441
    Location:93 → 290
    PBP2_MetR; The C-terminal substrate binding domain of LysR-type transcriptional regulator metR, which regulates the expression of methionine biosynthetic genes, contains type 2 periplasmic binding fold
    pfam00126
    Location:4 → 62
    HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
Nucleotide Protein
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