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hpcC 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 880100, updated on 24-Aug-2024

Summary

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Gene symbol
hpcC
Gene description
5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase
Locus tag
PA4123
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4611013..4612473)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene transcriptional regulator Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene homoprotocatechuate 2,3-dioxygenase Neighboring gene 5-carboxymethyl-2-hydroxymuconate isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within 4-hydroxyphenylacetate metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within cellular catabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase
NP_252812.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4611013..4612473
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252812.1 5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252812.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A367MI58
    Conserved Domains (1) summary
    cd07093
    Location:19 → 474
    ALDH_F8_HMSADH; Human aldehyde dehydrogenase family 8 member A1-like
Nucleotide Protein
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