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nirL heme d1 biosynthesis protein NirL [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 879762, updated on 11-Sep-2024

Summary

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Gene symbol
nirL
Gene description
heme d1 biosynthesis protein NirL
Locus tag
PA0514
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (575516..576040, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene cytochrome C Neighboring gene uroporphyrin-III C-methyltransferase Neighboring gene heme d1 biosynthesis protein NirJ Neighboring gene heme d1 biosynthesis protein NirH Neighboring gene heme d1 biosynthesis protein NirG Neighboring gene heme d1 biosynthesis protein NirD Neighboring gene heme d1 biosynthesis protein NirF Neighboring gene cytochrome c55X Neighboring gene cytochrome C-551

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  2. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  3. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  4. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article
  5. Effect of anaerobiosis and nitrate on gene expression in Pseudomonas aeruginosa. Filiatrault MJ, et al. Infect Immun, 2005 Jun. PMID 15908409, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within heme biosynthetic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
heme d1 biosynthesis protein NirL
NP_249205.1
  • possible siroheme decarboxylase subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    575516..576040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_249205.1 heme d1 biosynthesis protein NirL [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_249205.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P95413
    Conserved Domains (2) summary
    pfam17805
    Location:68 → 156
    AsnC_trans_reg2; AsnC-like ligand binding domain
    cl29894
    Location:26 → 104
    AsnC_trans_reg; Lrp/AsnC ligand binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P95413.1

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