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oprE anaerobically-induced outer membrane porin OprE [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 879473, updated on 10-Oct-2024

Summary

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Gene symbol
oprE
Gene description
anaerobically-induced outer membrane porin OprE
Locus tag
PA0291
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (327284..328666)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene transcriptional activator GpuR Neighboring gene hypothetical protein Neighboring gene agmatine deiminase Neighboring gene N-carbamoylputrescine amidohydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Outer membrane proteins responsible for the penetration of beta-lactams and quinolones in Pseudomonas aeruginosa. Yamano Y, et al. J Antimicrob Chemother, 1990 Aug. PMID 2120174
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables porin activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in outer membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
anaerobically-induced outer membrane porin OprE
NP_248982.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    327284..328666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_248982.1 anaerobically-induced outer membrane porin OprE [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_248982.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3XDA5, Q51510
    Conserved Domains (1) summary
    pfam03573
    Location:30 → 458
    OprD; outer membrane porin, OprD family
Nucleotide Protein
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