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sltB1 soluble lytic transglycosylase B [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878946, updated on 24-Aug-2024

Summary

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Gene symbol
sltB1
Gene description
soluble lytic transglycosylase B
Locus tag
PA4001
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4481230..4482252, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene lipoate-protein ligase B Neighboring gene hypothetical protein Neighboring gene D-ala-D-ala-carboxypeptidase Neighboring gene hypothetical protein Neighboring gene rod shape-determining protein Neighboring gene penicillin-binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interaction of penicillin-binding protein 2 with soluble lytic transglycosylase B1 in Pseudomonas aeruginosa. Legaree BA, et al. J Bacteriol, 2008 Oct. PMID 18708507, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A potential space-making role in cell wall biogenesis for SltB1and DacB revealed by a beta-lactamase induction phenotype in Pseudomonas aeruginosa.
    Title: A potential space-making role in cell wall biogenesis for SltB1and DacB revealed by a beta-lactamase induction phenotype in Pseudomonas aeruginosa.
  2. Penicillin-binding protein 2 (PBP2) was identified as a binding partner of SltB1, suggesting that the two proteins function together in the biosynthesis of peptidoglycan.
    Title: Interaction of penicillin-binding protein 2 with soluble lytic transglycosylase B1 in Pseudomonas aeruginosa.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables lytic transglycosylase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within peptidoglycan biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
soluble lytic transglycosylase B
NP_252690.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4481230..4482252 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252690.1 soluble lytic transglycosylase B [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252690.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3G1CIV9
    Conserved Domains (1) summary
    cl00222
    Location:43 → 333
    Lyz-like; lysozyme-like domains
Nucleotide Protein
Heading Accession and Version

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