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chiC chitinase [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878587, updated on 24-Aug-2024
Gene symbol
chiC
Gene description
chitinase
Locus tag
PA2300
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Sequence:
NC_002516.2 (2530389..2531840, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene ferredoxin Neighboring gene oxidoreductase Neighboring gene transcriptional regulator Neighboring gene hypothetical protein Neighboring gene protein AmbE

Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Exploring roles of the chitinase ChiC in modulating Pseudomonas aeruginosa virulence phenotypes. Edvardsen PKT, et al. Microbiol Spectr, 2024 Jul 2. PMID 38819151, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Exploring roles of the chitinase ChiC in modulating Pseudomonas aeruginosa virulence phenotypes.
    Title: Exploring roles of the chitinase ChiC in modulating Pseudomonas aeruginosa virulence phenotypes.
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Homology

Preferred Names
chitinase
NP_250990.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    2530389..2531840 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250990.1 chitinase [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250990.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0M4K3X3
    Conserved Domains (2) summary
    COG3469
    Location:1 → 336
    Chi1; Chitinase [Carbohydrate transport and metabolism]
    COG3979
    Location:340 → 483
    COG3979; Chitodextrinase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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