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secD preprotein translocase subunit SecD [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878279, updated on 24-Aug-2024

Summary

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Gene symbol
secD
Gene description
preprotein translocase subunit SecD
Locus tag
PA3821
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Genomic context

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Sequence:
NC_002516.2 (4277085..4278947, complement)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene preprotein translocase subunit SecF Neighboring gene preprotein translocase subunit YajC Neighboring gene queuine tRNA-ribosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SecD and SecF facilitate protein export in Escherichia coli. Pogliano JA, et al. EMBO J, 1994 Feb 1. PMID 8313900, Free PMC Article
  2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
  3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
  4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
  5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PseudoCAP

Process Evidence Code Pubs
acts_upstream_of_or_within protein secretion ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
acts_upstream_of_or_within secretion ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
preprotein translocase subunit SecD
NP_252510.1
  • Product name confidence: class 2 (High similarity to functionally studied protein)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    4277085..4278947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_252510.1 preprotein translocase subunit SecD [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_252510.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3M5ELG9
    Conserved Domains (2) summary
    PRK05812
    Location:8 → 620
    secD; preprotein translocase subunit SecD; Reviewed
    pfam13721
    Location:2 → 104
    SecD-TM1; SecD export protein N-terminal TM region
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9HXI1.1

Gene LinkOut

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