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cupA3 usher CupA3 [ Pseudomonas aeruginosa PAO1 ]

Gene ID: 878212, updated on 24-Aug-2024
Gene symbol
cupA3
Gene description
usher CupA3
Locus tag
PA2130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas aeruginosa PAO1 (strain: PAO1)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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Sequence:
NC_002516.2 (2343862..2346480)

NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene fimbrial subunit CupA1 Neighboring gene chaperone CupA2 Neighboring gene fimbrial subunit CupA4 Neighboring gene chaperone CupA5 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic Sequence:
NC_002516.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Biofilm formation in Pseudomonas aeruginosa: fimbrial cup gene clusters are controlled by the transcriptional regulator MvaT. Vallet I, et al. J Bacteriol, 2004 May. PMID 15090530, Free PMC Article
  2. The chaperone/usher pathways of Pseudomonas aeruginosa: identification of fimbrial gene clusters (cup) and their involvement in biofilm formation. Vallet I, et al. Proc Natl Acad Sci U S A, 2001 Jun 5. PMID 11381121, Free PMC Article
  3. Responses of Pseudomonas aeruginosa to low oxygen indicate that growth in the cystic fibrosis lung is by aerobic respiration. Alvarez-Ortega C, et al. Mol Microbiol, 2007 Jul. PMID 17581126, Free PMC Article
  4. SiaA and SiaD are essential for inducing autoaggregation as a specific response to detergent stress in Pseudomonas aeruginosa. Klebensberger J, et al. Environ Microbiol, 2009 Dec. PMID 19638175
  5. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by PseudoCAP

Function Evidence Code Pubs
enables fimbrial usher porin activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell adhesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cell aggregation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within cellular response to oxygen levels IEP
Inferred from Expression Pattern
more info
 PubMed 
Preferred Names
usher CupA3
NP_250820.1
  • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002516.2 Reference assembly

    Range
    2343862..2346480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_250820.1 usher CupA3 [Pseudomonas aeruginosa PAO1]

    See identical proteins and their annotated locations for NP_250820.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG3188
    Location:4 → 860
    FimD; Outer membrane usher protein FimD/PapC [Cell motility, Extracellular structures]
Nucleotide Protein
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