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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_003825.4 → NP_003816.2 synaptosomal-associated protein 23 isoform SNAP23A
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the longer transcript, containing eight exons and encoding the full-length isoform (SNAP23A).
- Source sequence(s)
-
AK290152, BC022890, BM782600
- Consensus CDS
-
CCDS10087.1
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
- Related
- ENSP00000249647.3, ENST00000249647.8
- Conserved Domains (3) summary
-
- cd15884
Location:149 → 207
- SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
- cd15895
Location:9 → 75
- SNARE_SNAP23N; N-terminal SNARE motif of SNAP23
- pfam00835
Location:86 → 147
- SNAP-25; SNAP-25 family
-
NM_130798.3 → NP_570710.1 synaptosomal-associated protein 23 isoform SNAP23B
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks internal exon 6 but maintains the same reading frame as compared to transcript variant 1. It encodes an isoform (SNAP23B) which is missing 53 aa as compared to the full-length isoform (SNAP23A) encoded by transcript variant 1. The missing region is required for nonspecific binding of the protein to plasma membranes, indicating a functional difference between isoforms SNAP23A and SNAP23B.
- Source sequence(s)
-
AK290152, BC022890, BM782600, DA650133
- Consensus CDS
-
CCDS10088.1
- Related
- ENSP00000207062.1, ENST00000349777.5
- Conserved Domains (2) summary
-
- cd15884
Location:96 → 154
- SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
- cl22856
Location:9 → 75
- SNARE; SNARE motif
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000015.10 Reference GRCh38.p14 Primary Assembly
- Range
-
42491129..42533058
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047433203.1 → XP_047289159.1 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_017022694.2 → XP_016878183.2 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_047433202.1 → XP_047289158.1 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_047433199.1 → XP_047289155.1 synaptosomal-associated protein 23 isoform X1
-
XM_047433200.1 → XP_047289156.1 synaptosomal-associated protein 23 isoform X1
-
XM_006720725.4 → XP_006720788.1 synaptosomal-associated protein 23 isoform X1
- Conserved Domains (3) summary
-
- cd15884
Location:160 → 218
- SNARE_SNAP23C; C-terminal SNARE motif of SNAP23
- cd15895
Location:9 → 75
- SNARE_SNAP23N; N-terminal SNARE motif of SNAP23
- pfam00835
Location:100 → 158
- SNAP-25; SNAP-25 family
Alternate T2T-CHM13v2.0
Genomic
-
NC_060939.1 Alternate T2T-CHM13v2.0
- Range
-
40297171..40339102
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054379043.1 → XP_054235018.1 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_054379042.1 → XP_054235017.1 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_054379041.1 → XP_054235016.1 synaptosomal-associated protein 23 isoform X2
- UniProtKB/Swiss-Prot
- O00161, O00162, Q13602, Q6IAE3
- UniProtKB/TrEMBL
-
A8K287
-
XM_054379040.1 → XP_054235015.1 synaptosomal-associated protein 23 isoform X1
-
XM_054379039.1 → XP_054235014.1 synaptosomal-associated protein 23 isoform X1