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NOL4 nucleolar protein 4 [ Homo sapiens (human) ]

Gene ID: 8715, updated on 20-Jun-2020

Summary

Official Symbol
NOL4provided by HGNC
Official Full Name
nucleolar protein 4provided by HGNC
Primary source
HGNC:HGNC:7870
See related
Ensembl:ENSG00000101746 MIM:603577
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NOLP; CT125; HRIHFB2255
Expression
Biased expression in brain (RPKM 3.8), testis (RPKM 3.2) and 4 other tissues See more
Orthologs

Genomic context

See NOL4 in Genome Data Viewer
Location:
18q12.1
Exon count:
22
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (33851100..34224957, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (31431064..31803515, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372059 Neighboring gene coiled-coil domain containing 178 Neighboring gene uncharacterized LOC107985157 Neighboring gene ASXL transcriptional regulator 3 Neighboring gene ribosomal protein L10a pseudogene 13 Neighboring gene dystrobrevin alpha Neighboring gene uncharacterized LOC105372061 Neighboring gene Sharpr-MPRA regulatory region 7107

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
A genomewide association study of citalopram response in major depressive disorder.
NHGRI GWA Catalog
Genetic variants associated with breast size also influence breast cancer risk.
NHGRI GWA Catalog

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
nucleolus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
nucleolar protein 4
Names
cancer/testis antigen 125
nucleolar localized protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001198546.1NP_001185475.1  nucleolar protein 4 isoform 2

    See identical proteins and their annotated locations for NP_001185475.1

    Status: VALIDATED

    Source sequence(s)
    AA430033, AB017800, AK297185, BC000313, BM973283, CA865522, CK822635
    UniProtKB/Swiss-Prot
    O94818
    UniProtKB/TrEMBL
    B4DLW2
    Related
    ENSP00000467629.1, ENST00000590712.5
  2. NM_001198547.1NP_001185476.1  nucleolar protein 4 isoform 3

    See identical proteins and their annotated locations for NP_001185476.1

    Status: VALIDATED

    Source sequence(s)
    AA430033, AK299850, BC000313, BM973283, CA865522, CK822635, DC375356
    Consensus CDS
    CCDS56059.1
    UniProtKB/Swiss-Prot
    O94818
    Related
    ENSP00000443472.1, ENST00000538587.5
  3. NM_001198548.1NP_001185477.1  nucleolar protein 4 isoform 4

    See identical proteins and their annotated locations for NP_001185477.1

    Status: VALIDATED

    Source sequence(s)
    AA430033, AB017800, BC000313, BM973283, CA865522, CK822635
    Consensus CDS
    CCDS59308.1
    UniProtKB/Swiss-Prot
    O94818
    Related
    ENSP00000465450.1, ENST00000589544.5
  4. NM_001198549.1NP_001185478.1  nucleolar protein 4 isoform 5

    See identical proteins and their annotated locations for NP_001185478.1

    Status: VALIDATED

    Source sequence(s)
    AA430033, AK296539, BC000313, BM973283, CA865522, CK822635, DC350556
    Consensus CDS
    CCDS56058.1
    UniProtKB/Swiss-Prot
    O94818
    Related
    ENSP00000445733.1, ENST00000535384.5
  5. NM_001282527.1NP_001269456.1  nucleolar protein 4 isoform 6

    See identical proteins and their annotated locations for NP_001269456.1

    Status: VALIDATED

    Source sequence(s)
    AA430033, AK091463, BC000313, BM973283, CA865522, CK822635, DC375356
    UniProtKB/Swiss-Prot
    O94818
    UniProtKB/TrEMBL
    B3KRF4
  6. NM_001353232.1NP_001340161.1  nucleolar protein 4 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985, BM973283
  7. NM_001353233.1NP_001340162.1  nucleolar protein 4 isoform 8

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985, BM973283
  8. NM_001353234.1NP_001340163.1  nucleolar protein 4 isoform 9

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985, BM973283
  9. NM_001353235.1NP_001340164.1  nucleolar protein 4 isoform 10

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985, BM973283
  10. NM_001353236.1NP_001340165.1  nucleolar protein 4 isoform 11

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, BM973283
  11. NM_001353237.1NP_001340166.1  nucleolar protein 4 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985, BM973283
  12. NM_001384467.1NP_001371396.1  nucleolar protein 4 isoform 13

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  13. NM_001384468.1NP_001371397.1  nucleolar protein 4 isoform 14

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  14. NM_001384469.1NP_001371398.1  nucleolar protein 4 isoform 15

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  15. NM_001384470.1NP_001371399.1  nucleolar protein 4 isoform 16

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  16. NM_001384471.1NP_001371400.1  nucleolar protein 4 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  17. NM_001384472.1NP_001371401.1  nucleolar protein 4 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  18. NM_001384473.1NP_001371402.1  nucleolar protein 4 isoform 17

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
  19. NM_003787.5NP_003778.2  nucleolar protein 4 isoform 1

    See identical proteins and their annotated locations for NP_003778.2

    Status: VALIDATED

    Source sequence(s)
    AC010798, AC018972, AC087397, AC104985
    Consensus CDS
    CCDS11907.2
    UniProtKB/Swiss-Prot
    O94818
    Related
    ENSP00000261592.4, ENST00000261592.9

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    33851100..34224957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017026055.2XP_016881544.1  nucleolar protein 4 isoform X5

    UniProtKB/TrEMBL
    B3KRF4
  2. XM_017026059.2XP_016881548.1  nucleolar protein 4 isoform X6

    UniProtKB/Swiss-Prot
    O94818
  3. XM_011526239.3XP_011524541.1  nucleolar protein 4 isoform X4

    See identical proteins and their annotated locations for XP_011524541.1

  4. XM_017026054.2XP_016881543.1  nucleolar protein 4 isoform X4

  5. XM_017026058.2XP_016881547.1  nucleolar protein 4 isoform X4

  6. XM_017026053.2XP_016881542.1  nucleolar protein 4 isoform X4

  7. XM_017026052.2XP_016881541.1  nucleolar protein 4 isoform X3

  8. XM_017026060.2XP_016881549.1  nucleolar protein 4 isoform X7

  9. XM_011526238.2XP_011524540.1  nucleolar protein 4 isoform X2

    See identical proteins and their annotated locations for XP_011524540.1

    UniProtKB/Swiss-Prot
    O94818
  10. XM_011526237.2XP_011524539.1  nucleolar protein 4 isoform X1

    See identical proteins and their annotated locations for XP_011524539.1

    UniProtKB/Swiss-Prot
    O94818
  11. XM_006722563.3XP_006722626.1  nucleolar protein 4 isoform X1

    See identical proteins and their annotated locations for XP_006722626.1

    UniProtKB/Swiss-Prot
    O94818
  12. XM_024451279.1XP_024307047.1  nucleolar protein 4 isoform X2

RNA

  1. XR_002958188.1 RNA Sequence

  2. XR_935261.3 RNA Sequence

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