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CG42638 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 8673965, updated on 10-Jan-2019

Summary

Official Symbol
CG42638provided by FlyBase
Primary source
FLYBASE:FBgn0261361
Locus tag
Dmel_CG42638
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG42638; noncoding_13567

Genomic context

See CG42638 in Genome Data Viewer
Location:
76C3-76C3; 3-46 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.18 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19745834..19749744, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19738934..19742844, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Transient receptor potential cation channel, mucolipin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Guanylyl cyclase at 76C Neighboring gene male sterile (3) 76Ca Neighboring gene Sterol regulatory element binding protein Neighboring gene mir-33 stem loop

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
NAADP-sensitive calcium-release channel activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cation channel activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
lysosomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein
Names
CG42638-PA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    19745834..19749744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001170001.2NP_001163472.1  uncharacterized protein Dmel_CG42638 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001163472.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VW35
    Related
    FBpp0291489, FBtr0302283
    Conserved Domains (1) summary
    pfam00520
    Location:403578
    Ion_trans; Ion transport protein
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