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Xcel_2233 DNA polymerase LigD, polymerase domain-containing protein [ Xylanimonas cellulosilytica DSM 15894 ]

Gene ID: 8649767, discontinued on 6-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
Xcel_2233
Gene description
DNA polymerase LigD, polymerase domain-containing protein
Locus tag
Xcel_2233
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xylanimonas cellulosilytica DSM 15894 (strain: DSM 15894)
Lineage
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Promicromonosporaceae; Xylanimonas

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA polymerase LigD, polymerase domain-containing protein
YP_003326809.1
  • TIGRFAM: DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, ligase domain protein
    PFAM: ATP dependent DNA ligase; DNA primase small subunit; ATP dependent DNA ligase domain protein
    KEGG: mpt:Mpe_B0011 ATP-dependent DNA ligase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013530.1 Reference assembly

    Range
    2411221..2413797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003326809.1 DNA polymerase LigD, polymerase domain-containing protein [Xylanimonas cellulosilytica DSM 15894]

    Status: PROVISIONAL

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