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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_013369.1 RefSeqGene
- Range
-
4692..26007
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001166292.2 → NP_001159764.1 protein patched homolog 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (2) has a distinct C-terminus and is shorter than isoform 1.
- Source sequence(s)
-
AA781365, AF119569, AI798853, AL136380, AY359016, BX089003
- Consensus CDS
-
CCDS53312.1
- UniProtKB/Swiss-Prot
-
Q9Y6C5
- Related
- ENSP00000389703.2, ENST00000447098.6
- Conserved Domains (2) summary
-
- TIGR00918
Location:12 → 1142
- 2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
- pfam12349
Location:418 → 570
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
-
NM_003738.5 → NP_003729.3 protein patched homolog 2 isoform 1
See identical proteins and their annotated locations for NP_003729.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the shorter transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF119569, AL136380, AL592166, AY359016
- Consensus CDS
-
CCDS516.1
- UniProtKB/Swiss-Prot
- O95341, O95856, Q53Z57, Q5QP87, Q6UX14, Q9Y6C5
- Related
- ENSP00000361266.3, ENST00000372192.4
- Conserved Domains (2) summary
-
- TIGR00918
Location:12 → 1142
- 2A060602; The Eukaryotic (Putative) Sterol Transporter (EST) Family
- pfam12349
Location:418 → 570
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
44819845..44843253 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
44691074..44714486 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)