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orcE origin recognition complex subunit 5 [ Dictyostelium discoideum AX4 ]

Gene ID: 8629126, updated on 23-Nov-2023

Summary

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Gene symbol
orcE
Gene description
origin recognition complex subunit 5
Primary source
dictyBase:DDB_G0293214
Locus tag
DDB_G0293214
Gene type
protein coding
RNA name
origin recognition complex subunit 5
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0191826; DDBDRAFT_0233112; DDB_0191826; DDB_0233112
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_007092.3 (2694152..2696012)

Chromosome 6 - NC_007092.3Genomic Context describing neighboring genes Neighboring gene vacuolar sorting protein 35 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007092.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA replication origin binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
  
involved_in DNA replication initiation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of nuclear origin of replication recognition complex IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
  
part_of origin recognition complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
origin recognition complex subunit 5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007092.3 Reference assembly

    Range
    2694152..2696012
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_629242.1 → XP_629244.1  origin recognition complex subunit 5 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_629244.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54C22
    Conserved Domains (1) summary
    pfam14630
    Location:263 → 561
    ORC5_C; Origin recognition complex (ORC) subunit 5 C-terminus
Nucleotide Protein
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Gene LinkOut

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