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atr1 ATR subfamily protein kinase [ Dictyostelium discoideum AX4 ]

Gene ID: 8628122, updated on 22-May-2018

Summary

Gene symbol
atr1
Gene description
ATR subfamily protein kinase
Primary source
dictyBase:DDB_G0291380
Locus tag
DDB_G0291380
Gene type
protein coding
RNA name
protein kinase, Atypical group
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0183856; DDBDRAFT_0229332; DDB_0183856; DDB_0229332

Genomic context

Location:
chromosome: 6
Exon count:
5
Sequence:
Chromosome: 6; NC_007092.3 (214264..224083, complement)

Chromosome 6 - NC_007092.3Genomic Context describing neighboring genes Neighboring gene ARD/ARD' family protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA repair IEA
Inferred from Electronic Annotation
more info
 
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Names
ATR subfamily protein kinase
PIKK family protein kinase
phosphatidylinositol 3-kinase-related protein kinase
protein kinase, Atypical group

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007092.3 Reference assembly

    Range
    214264..224083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_630084.1XP_635176.1  protein kinase, Atypical group [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_635176.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54ER4
    Conserved Domains (4) summary
    smart00802
    Location:15311634
    UME; Domain in UVSB PI-3 kinase, MEI-41 and ESR-1
    cd00892
    Location:28143080
    PIKKc_ATR; Catalytic domain of Ataxia telangiectasia and Rad3-related proteins
    pfam02259
    Location:22522621
    FAT; FAT domain
    pfam02260
    Location:31273157
    FATC; FATC domain
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