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DDB_G0287711 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8626257, updated on 11-Apr-2024

Summary

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Gene symbol
DDB_G0287711
Gene description
hypothetical protein
Primary source
dictyBase:DDB_G0287711
Locus tag
DDB_G0287711
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0187583; DDB_0187583
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_007091.3 (588099..589683, complement)

Chromosome 5 - NC_007091.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene RNA polymerase III subunit Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007091.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables L-phenylalanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables aromatic-amino-acid:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
  
enables transaminase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in L-kynurenine metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in alpha-amino acid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Names
hypothetical protein
XP_637002.1
  • MGC68542 protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007091.3 Reference assembly

    Range
    588099..589683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_631910.1 → XP_637002.1  hypothetical protein DDB_G0287711 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_637002.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54K00
    Conserved Domains (2) summary
    cd00609
    Location:40 → 432
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    COG0436
    Location:21 → 436
    AspB; Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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