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H2Bv3 histone H2B domain-containing protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8625650, updated on 14-Nov-2024
Official Symbol
H2Bv3
Official Full Name
histone H2B domain-containing protein
Primary source
dictyBase:DDB_G0286509
Locus tag
DDB_G0286509
See related
AmoebaDB:DDB_G0286509; VEuPathDB:DDB_G0286509
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0218827; DDBDRAFT_0231622; DDB_0218827; DDB_0231622
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See H2Bv3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_007090.3 (4575107..4575571)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene DUF171 family protein Neighboring gene RNA recognition motif-containing protein RRM Neighboring gene hypothetical protein Neighboring gene Rab GTPase domain-containing protein

Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A brilliant monomeric red fluorescent protein to visualize cytoskeleton dynamics in Dictyostelium. Fischer M, et al. FEBS Lett, 2004 Nov 5. PMID 15527790
  2. Toxic effects of mercury on the cell nucleus of Dictyostelium discoideum. Boatti L, et al. Environ Toxicol, 2017 Feb. PMID 26888062
  3. Proteomic profiling of the extracellular matrix (slime sheath) of Dictyostelium discoideum. Huber RJ, et al. Proteomics, 2015 Oct. PMID 26152465
  4. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in response to mercury ion IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular matrix HDA PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
histone H2B domain-containing protein

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    4575107..4575571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_632592.1 → XP_637684.1  histone H2B domain-containing protein [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_637684.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54LP8
    Conserved Domains (1) summary
    cl23830
    Location:50 → 147
    H2B; Histone H2B
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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