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EGF-like domain-containing protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8625292, updated on 18-Sep-2024

Summary

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Official Full Name
EGF-like domain-containing protein
Primary source
dictyBase:DDB_G0295485
Locus tag
DDB_G0295485
See related
AmoebaDB:DDB_G0295485; VEuPathDB:DDB_G0295485
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
Old locus tag
DDBDRAFT_0235380; DDB_0235380
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_007090.3 (3666930..3672240, complement)

Chromosome 4 - NC_007090.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene BRWD group protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007090.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
EGF-like domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007090.3 Reference assembly

    Range
    3666930..3672240 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001732964.1 → XP_001733016.1  EGF-like domain-containing protein [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_001733016.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0G154
    Conserved Domains (6) summary
    smart00179
    Location:520 → 557
    EGF_CA; Calcium-binding EGF-like domain
    cd00603
    Location:1295 → 1375
    IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
    pfam01833
    Location:1209 → 1290
    TIG; IPT/TIG domain
    pfam06247
    Location:662 → 748
    Plasmod_Pvs28; Plasmodium ookinete surface protein Pvs28
    pfam14670
    Location:278 → 313
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:551 → 596
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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