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rab32C Rab GTPase [ Dictyostelium discoideum AX4 ]

Gene ID: 8620061, updated on 11-Apr-2024

Summary

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Gene symbol
rab32C
Gene description
Rab GTPase
Primary source
dictyBase:DDB_G0275675
Locus tag
DDB_G0275675
Gene type
protein coding
RNA name
Rab GTPase
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0167261; DDBDRAFT_0230000; DDB_0167261; DDB_0230000
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_007088.5 (5696031..5696705)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene transmembrane protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in melanosome organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in trans-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Names
Rab GTPase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    5696031..5696705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_638388.1 → XP_643480.1  Rab GTPase [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_643480.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q553M1, Q8MXQ2
    Conserved Domains (2) summary
    smart00175
    Location:29 → 192
    RAB; Rab subfamily of small GTPases
    cl21455
    Location:29 → 224
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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