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pks8 beta-ketoacyl synthase family protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8618020, updated on 21-Jun-2023

Summary

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Gene symbol
pks8
Gene description
beta-ketoacyl synthase family protein
Primary source
dictyBase:DDB_G0271618
Locus tag
DDB_G0271618
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0216869; DDBDRAFT_0216870; DDBDRAFT_0235164; DDB_0216869; DDB_0216870; DDB_0235164
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_007088.5 (530981..538599)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene pseudo Neighboring gene beta-ketoacyl synthase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
beta-ketoacyl synthase family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    530981..538599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001732912.1 → XP_001732964.1  hypothetical protein DDB_G0271618 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_001732964.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    B0G101, Q86AE5, Q86JI2
    Conserved Domains (6) summary
    cd05195
    Location:1819 → 2123
    enoyl_red; enoyl reductase of polyketide synthase
    cd08954
    Location:2130 → 2397
    KR_1_FAS_SDR_x; beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs
    COG3321
    Location:13 → 904
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    pfam08242
    Location:1403 → 1522
    Methyltransf_12; Methyltransferase domain
    pfam00550
    Location:2438 → 2498
    PP-binding; Phosphopantetheine attachment site
    cl21454
    Location:1494 → 1813
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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