U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

acbA acyl-CoA binding protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8617276, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
acbA
Gene description
acyl-CoA binding protein
Primary source
dictyBase:DDB_G0270658
Locus tag
DDB_G0270658
Gene type
protein coding
RNA name
acyl-CoA binding protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0201872; DDBDRAFT_0231469; DDB_0201872; DDB_0231469
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_007087.3 (3673860..3674359)

Chromosome 1 - NC_007087.3Genomic Context describing neighboring genes Neighboring gene histidine-tRNA ligase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene D-fructose-1,6-bisphosphate 1-phosphohydrolase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_007087.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unconventional secretion of AcbA in Dictyostelium discoideum through a vesicular intermediate. Cabral M, et al. Eukaryot Cell, 2010 Jul. PMID 20472692, Free PMC Article
  2. Peptide signaling during terminal differentiation of Dictyostelium. Anjard C, et al. Proc Natl Acad Sci U S A, 2005 May 24. PMID 15897458, Free PMC Article
  3. Global transcriptional responses to cisplatin in Dictyostelium discoideum identify potential drug targets. Van Driessche N, et al. Proc Natl Acad Sci U S A, 2007 Sep 25. PMID 17878305, Free PMC Article
  4. Leaps and lulls in the developmental transcriptome of Dictyostelium discoideum. Rosengarten RD, et al. BMC Genomics, 2015 Apr 13. PMID 25887420, Free PMC Article
  5. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AcbA is localized in vesicles that accumulate in the cortex of prespore cells just prior to sporulation.
    Title: Unconventional secretion of AcbA in Dictyostelium discoideum through a vesicular intermediate.
Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables fatty-acyl-CoA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
  
enables lipid binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase binding IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables protein kinase inhibitor activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within culmination involved in sorocarp development IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in cytokinin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
  
involved_in fatty acid metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in protein processing IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in sporulation resulting in formation of a cellular spore IEA
Inferred from Electronic Annotation
more info
  
involved_in sporulation resulting in formation of a cellular spore IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cell cortex IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in extracellular region IMP
Inferred from Mutant Phenotype
more info
 PubMed 
located_in vesicle IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
acyl-CoA binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007087.3 Reference assembly

    Range
    3673860..3674359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_641229.1 → XP_646321.1  acyl-CoA binding protein [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_646321.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q55D10, Q5FXM5
    Conserved Domains (1) summary
    pfam00887
    Location:4 → 80
    ACBP; Acyl CoA binding protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Miscellaneous