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CBG03980 Protein CBG03980 [ Caenorhabditis briggsae ]

Gene ID: 8581385, updated on 25-Jan-2024

Summary

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Gene symbol
CBG03980
Gene description
Protein CBG03980
Locus tag
CBG_03980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Caenorhabditis briggsae (strain: AF16)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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Location:
chromosome: I
Exon count:
9
Sequence:
Chromosome: I; NC_013489.2 (4686016..4687599)

Chromosome I - NC_013489.2Genomic Context describing neighboring genes Neighboring gene Protein CBG03982 Neighboring gene Protein CBR-ZWL-1 Neighboring gene Protein CBG03979 Neighboring gene Protein CBR-SYDN-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_013489.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K79 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription regulatory region DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Protein CBG03980
XP_002639392.1
  • contains similarity to Pfam domain PF08123 Histone methylation protein DOT1 contains similarity to Interpro domain IPR013110 (Histone methylation DOT1);
    Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013489.2 Reference assembly

    Range
    4686016..4687599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002639346.1 → XP_002639392.1  Protein CBG03980 [Caenorhabditis briggsae]

    See identical proteins and their annotated locations for XP_002639392.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A8WVW6
    Conserved Domains (1) summary
    cl17173
    Location:147 → 351
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
Nucleotide Protein
Heading Accession and Version

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