Format

Send to:

Choose Destination

CCA1 tRNA adenylyltransferase [ Saccharomyces cerevisiae S288C ]

Gene ID: 856915, updated on 5-Nov-2017
Gene symbol
CCA1
Gene description
tRNA adenylyltransferase
Primary source
SGD:S000000970
Locus tag
YER168C
Gene type
protein coding
RNA name
tRNA adenylyltransferase
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
TNT1
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (521029..522669, complement)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene aminophospholipid-translocating P4-type ATPase DNF1 Neighboring gene Bck2p Neighboring gene Rph1p Neighboring gene adenylate kinase ADK2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • RNA transport, organism-specific biosystem (from KEGG)
    RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
  • RNA transport, conserved biosystem (from KEGG)
    RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
CTP:3'-cytidine-tRNA cytidylyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
CTP:3'-cytidine-tRNA cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
CTP:tRNA cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
RNA binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
tRNA adenylyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
RNA processing IEA
Inferred from Electronic Annotation
more info
 
tRNA 3'-terminal CCA addition IDA
Inferred from Direct Assay
more info
PubMed 
tRNA 3'-terminal CCA addition IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasm NAS
Non-traceable Author Statement
more info
PubMed 
mitochondrial matrix IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
nucleus NAS
Non-traceable Author Statement
more info
PubMed 
Names
tRNA adenylyltransferase
NP_011095.1
  • ATP (CTP):tRNA-specific tRNA nucleotidyltransferase; different forms targeted to the nucleus, cytosol, and mitochondrion are generated via the use of multiple transcriptional and translational start sites; human homolog TRNT1 complements yeast null mutant

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    521029..522669 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179058.1NP_011095.1  TPA: tRNA adenylyltransferase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011095.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P21269
    Conserved Domains (3) summary
    COG0617
    Location:37532
    PcnB; tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]
    pfam01743
    Location:63205
    PolyA_pol; Poly A polymerase head domain
    pfam12627
    Location:232291
    PolyA_pol_RNAbd; Probable RNA and SrmB- binding site of polymerase A
Support Center