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TMA20 translation machinery-associated protein 20 [ Saccharomyces cerevisiae S288C ]

Gene ID: 856725, updated on 3-May-2025
Official Symbol
TMA20
Official Full Name
translation machinery-associated protein 20
Primary source
SGD:S000002957
Locus tag
YER007C-A
See related
AllianceGenome:SGD:S000002957; FungiDB:YER007C-A; VEuPathDB:YER007C-A
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable RNA binding activity. Involved in ribosome biogenesis. Acts upstream of or within nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Located in cytosol. Human ortholog(s) of this gene implicated in immunodeficiency 118. Orthologous to several human genes including MCTS1 (MCTS1 re-initiation and release factor). [provided by Alliance of Genome Resources, May 2025]
Orthologs
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Location:
chromosome: V
Exon count:
2
Sequence:
Chromosome: V; NC_001137.3 (166237..166885, complement)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene RNA-binding GTPase NUG1 Neighboring gene Pac2p Neighboring gene ncRNA Neighboring gene GTP-Rho binding exocyst subunit SEC3

Genomic Sequence:
NC_001137.3

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
translation machinery-associated protein 20
NP_010923.3
  • Ribosome-associated protein; involved along with heterodimeric partner Tma22p in recycling of 40S ribosomal subunits; involved in nonsense-mediated mRNA decay (NMD); contains a putative RNA binding domain; null mutant exhibits translation defects; localizes to the cytosol; has homology to human oncogene MCT-1; protein abundance increases in response to DNA replication stress

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    166237..166885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180857.3NP_010923.3  TPA: translation machinery-associated protein 20 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010923.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DLQ4, P89886
    UniProtKB/TrEMBL
    A6ZQV4, B3LS19, C8Z707, G2WCN8, N1PA81
    Conserved Domains (1) summary
    COG2016
    Location:12181
    Tma20; Predicted ribosome-associated RNA-binding protein Tma20, contains PUA domain [Translation, ribosomal structure and biogenesis]