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USV1 Usv1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855871, updated on 9-Sep-2018

Summary

Gene symbol
USV1
Gene description
Usv1p
Primary source
SGD:S000006151
Locus tag
YPL230W
Gene type
protein coding
RNA name
Usv1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
NSF1

Genomic context

See USV1 in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (115312..116487)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene syntaxin Neighboring gene trifunctional fatty acid synthase subunit FAS2 Neighboring gene hypothetical protein Neighboring gene polynucleotide 5'-phosphatase

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding HDA PubMed 
Component Evidence Code Pubs
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Usv1p
NP_015094.1
  • Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    115312..116487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184044.1NP_015094.1  TPA: Usv1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015094.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q12132
    Conserved Domains (4) summary
    COG5048
    Location:11389
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:4366
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:4166
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:5883
    zf-H2C2_2; Zinc-finger double domain
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