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HFI1 Hfi1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855821, updated on 7-Apr-2019

Summary

Gene symbol
HFI1
Gene description
Hfi1p
Primary source
SGD:S000006175
Locus tag
YPL254W
Gene type
protein coding
RNA name
Hfi1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
ADA1; GAN1; SRM12; SUP110

Genomic context

See HFI1 in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (69485..70951)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene cyclin CLN2 Neighboring gene Bbp1p Neighboring gene Vik1p Neighboring gene adrenodoxin

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
contributes_to histone acetyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transcription coactivator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transcription coactivator activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription coregulator activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
chromatin organization IDA
Inferred from Direct Assay
more info
PubMed 
histone H3 acetylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
histone acetylation IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of nucleic acid-templated transcription IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
Ada2/Gcn5/Ada3 transcription activator complex IDA
Inferred from Direct Assay
more info
PubMed 
SAGA complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
SAGA complex IDA
Inferred from Direct Assay
more info
PubMed 
SAGA-type complex IEA
Inferred from Electronic Annotation
more info
 
SLIK (SAGA-like) complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Hfi1p
NP_015069.1
  • Adaptor protein required for structural integrity of the SAGA complex; a histone acetyltransferase-coactivator complex that is involved in global regulation of gene expression through acetylation and transcription functions

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    69485..70951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184068.1NP_015069.1  TPA: Hfi1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015069.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q12060
    Conserved Domains (2) summary
    pfam12767
    Location:58316
    SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit
    cl05005
    Location:275367
    TAF4; TATA Binding Protein (TBP) Associated Factor 4 (TAF4) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
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