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COG6 Golgi transport complex subunit COG6 [ Saccharomyces cerevisiae S288C ]

Gene ID: 855687, updated on 18-Sep-2024

Summary

Official Symbol
COG6
Official Full Name
Golgi transport complex subunit COG6
Primary source
SGD:S000004986
Locus tag
YNL041C
See related
AllianceGenome:SGD:S000004986; FungiDB:YNL041C; VEuPathDB:YNL041C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
COD2; SEC37
Summary
Involved in cytoplasm to vacuole transport by the Cvt pathway and intra-Golgi vesicle-mediated transport. Part of Golgi transport complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type IIl. Orthologous to human COG6 (component of oligomeric golgi complex 6). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See COG6 in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (549468..551987, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene uncharacterized protein Neighboring gene Bop3p Neighboring gene uncharacterized protein Neighboring gene putative alanine--tRNA ligase

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in cytoplasm to vacuole targeting by the Cvt pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intra-Golgi vesicle-mediated transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
involved_in intra-Golgi vesicle-mediated transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
part_of Golgi transport complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 
part_of Golgi transport complex IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Golgi transport complex subunit COG6
NP_014357.1
  • Component of the conserved oligomeric Golgi complex; a cytosolic tethering complex (Cog1p through Cog8p) that functions in protein trafficking to mediate fusion of transport vesicles to Golgi compartments

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    549468..551987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182880.1NP_014357.1  TPA: Golgi transport complex subunit COG6 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014357.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZS37, D6W1D8, P53959
    UniProtKB/TrEMBL
    G2WM62, N1NY18
    Conserved Domains (1) summary
    smart01087
    Location:195834
    COG6; Conserved oligomeric complex COG6