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LDO16 Ldo16p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855179, updated on 3-May-2025
Official Symbol
LDO16
Official Full Name
Ldo16p
Primary source
SGD:S000004756
Locus tag
YMR148W
See related
AllianceGenome:SGD:S000004756; FungiDB:YMR148W; VEuPathDB:YMR148W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
OSW5
Summary
Involved in ascospore wall assembly and lipid droplet organization. Is active in lipid droplet. [provided by Alliance of Genome Resources, May 2025]
Orthologs
all
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See LDO16 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (560366..560812)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone reductase (H(+)-translocating) NDE1 Neighboring gene translation initiation factor eIF3 subunit i Neighboring gene Ldo45p Neighboring gene dolichyl-diphosphooligosaccharide-protein glycotransferase Neighboring gene endopeptidase catalytic subunit IMP1

Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing. Yassour M, et al. Proc Natl Acad Sci U S A, 2009 Mar 3. PMID 19208812, Free PMC Article
  2. LDO proteins and Vac8 form a vacuole-lipid droplet contact site to enable starvation-induced lipophagy in yeast. Álvarez-Guerra I, et al. Dev Cell, 2024 Mar 25. PMID 38354739
  3. A metabolically controlled contact site between vacuoles and lipid droplets in yeast. Diep DTV, et al. Dev Cell, 2024 Mar 25. PMID 38367622
  4. Identification of seipin-linked factors that act as determinants of a lipid droplet subpopulation. Eisenberg-Bord M, et al. J Cell Biol, 2018 Jan 2. PMID 29187527, Free PMC Article
  5. Regulation of lipid droplets by metabolically controlled Ldo isoforms. Teixeira V, et al. J Cell Biol, 2018 Jan 2. PMID 29187528, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables protein-containing complex binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in ascospore wall assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in lipid droplet organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within sporulation resulting in formation of a cellular spore IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in lipid droplet IDA
Inferred from Direct Assay
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
Ldo16p
NP_013868.1
  • hypothetical protein with possible role in spore wall assembly; predicted to contain an N-terminal transmembrane domain; osw5 null mutant spores exhibit increased spore wall permeability and sensitivity to beta-glucanase digestion

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    560366..560812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182650.1 → NP_013868.1  TPA: Ldo16p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013868.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZMK7, B3LM36, C7GQ88, C8ZF05, D6VZX0, P40219
    UniProtKB/TrEMBL
    G2WKJ9, N1NYV1
    Conserved Domains (1) summary
    pfam17062
    Location:6 → 74
    Osw5; Outer spore wall 5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40219.1

Gene LinkOut

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