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RPS16A ribosomal 40S subunit protein S16A [ Saccharomyces cerevisiae S288C ]

Gene ID: 855174, updated on 17-May-2024

Summary

Gene symbol
RPS16A
Gene description
ribosomal 40S subunit protein S16A
Primary source
FungiDB:YMR143W
Locus tag
YMR143W
See related
SGD:S000004751; AllianceGenome:SGD:S000004751; VEuPathDB:YMR143W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Part of 90S preribosome. Orthologous to human RPS16 (ribosomal protein S16). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See RPS16A in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
2
Sequence:
Chromosome: XIII; NC_001145.3 (551928..552903)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ribosomal 60S subunit protein L13B Neighboring gene Fdo1p Neighboring gene NADH-ubiquinone reductase (H(+)-translocating) NDE1

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
enables structural constituent of ribosome NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
part_of 90S preribosome HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of cytosolic small ribosomal subunit NAS
Non-traceable Author Statement
more info
PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribosomal 40S subunit protein S16A
NP_013863.2
  • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S16 and bacterial S9; RPS16A has a paralog, RPS16B, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    551928..552903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182645.1NP_013863.2  TPA: ribosomal 40S subunit protein S16A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013863.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VRR6, P0CX51, P0CX52, P26787, P40213
    UniProtKB/TrEMBL
    A6ZMK2, B3LGX7, C7GQ83, C8Z6M1, G2WC80, N1P5Z6
    Conserved Domains (1) summary
    PLN00210
    Location:3143
    PLN00210; 40S ribosomal protein S16; Provisional