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VRL1 Vrl1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855011, updated on 15-Mar-2026
Official Symbol
VRL1
Official Full Name
Vrl1p
Primary source
SGD:S000004461
Locus tag
YML002W
See related
AllianceGenome:SGD:S000004461; FungiDB:YML002W; VEuPathDB:YML002W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Orthologs
all
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See VRL1 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (264541..266754)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene lactoylglutathione lyase GLO1 Neighboring gene uncharacterized protein Neighboring gene Rab family GTPase YPT7 Neighboring gene polo kinase CDC5

Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. N-terminal signals in the SNX-BAR paralogs Vps5 and Vin1 guide endosomal coat complex formation. Shortill SP, et al. Mol Biol Cell, 2024 Jun 1. PMID 38598303, Free PMC Article
  2. Genome-wide analysis of yeast transcription upon calcium shortage. Lombardía LJ, et al. Cell Calcium, 2002 Aug. PMID 12161108
  3. Vrl1 relies on its VPS9-domain to play a role in autophagy in Saccharomyces cerevisiae. Li W, et al. Cell Biol Int, 2019 Aug. PMID 31038239
  4. Response of genes associated with mitochondrial function to mild heat stress in yeast Saccharomyces cerevisiae. Sakaki K, et al. J Biochem, 2003 Sep. PMID 14561723
  5. Identification of genes affecting vacuole membrane fragmentation in Saccharomyces cerevisiae. Michaillat L, et al. PLoS One, 2013. PMID 23383298, Free PMC Article

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
Preferred Names
Vrl1p
NP_013712.1
  • hypothetical protein; expression induced by heat and by calcium shortage; in many strains, YML002W is continuous with YML003W, and is predicted to encode a single protein of 1090 aa with a full-length VPS9 domain; in strains S288C, W303, and CEN.PK, a single thymine residue is deleted near the 3' end of YML003W at ChrXIII:264337, causing a frameshift and premature stop codon, truncating YML003W

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    264541..266754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182357.1 → NP_013712.1  Vrl1p

    See identical proteins and their annotated locations for NP_013712.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZH3, P0CF17
    UniProtKB/TrEMBL
    N1P045
    Conserved Domains (1) summary
    cl19569
    Location:8 → 79
    VPS9; Vacuolar sorting protein 9 (VPS9) domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CF17.1

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