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VPS71 Vps71p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854966, updated on 5-Nov-2017
Gene symbol
VPS71
Gene description
Vps71p
Primary source
SGD:S000004505
Locus tag
YML041C
Gene type
protein coding
RNA name
Vps71p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
SWC6
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (194913..195755, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Rrn11p Neighboring gene carnitine O-acetyltransferase CAT2 Neighboring gene tRNA Neighboring gene gag protein Neighboring gene gag-pol fusion protein

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
histone deacetylase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleosome binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
chromatin remodeling IDA
Inferred from Direct Assay
more info
PubMed 
chromatin remodeling IGI
Inferred from Genetic Interaction
more info
PubMed 
chromatin remodeling IMP
Inferred from Mutant Phenotype
more info
PubMed 
covalent chromatin modification IEA
Inferred from Electronic Annotation
more info
 
histone exchange IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein targeting to vacuole IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of histone deacetylation IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
Swr1 complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Vps71p
NP_013671.1
  • Nucleosome-binding component of the SWR1 complex; SWR1 exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for vacuolar protein sorting

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    194913..195755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182399.1NP_013671.1  TPA: Vps71p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013671.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q03433
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