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VAN1 Van1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854925, updated on 9-Jun-2019

Summary

Gene symbol
VAN1
Gene description
Van1p
Primary source
SGD:S000004583
Locus tag
YML115C
Gene type
protein coding
RNA name
Van1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
LDB13; VRG7; VRG8

Genomic context

See VAN1 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (40187..41794, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Nab6p Neighboring gene borate transporter Neighboring gene Taf8p Neighboring gene Dat1p

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
contributes_to alpha-1,6-mannosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
contributes_to alpha-1,6-mannosyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
cell wall mannoprotein biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell wall mannoprotein biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
mannosylation IEA
Inferred from Electronic Annotation
more info
 
protein N-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein N-linked glycosylation IDA
Inferred from Direct Assay
more info
PubMed 
protein N-linked glycosylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of growth IEA
Inferred from Electronic Annotation
more info
 
sporulation resulting in formation of a cellular spore IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
Golgi membrane IEA
Inferred from Electronic Annotation
more info
 
alpha-1,6-mannosyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
alpha-1,6-mannosyltransferase complex IPI
Inferred from Physical Interaction
more info
PubMed 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Van1p
NP_013592.1
  • Component of the mannan polymerase I; complex contains Van1p and Mnn9p and is involved in the first steps of mannan synthesis; mutants are vanadate-resistant

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    40187..41794 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182477.1NP_013592.1  TPA: Van1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013592.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P23642
    Conserved Domains (1) summary
    pfam03452
    Location:171480
    Anp1; Anp1
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