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SEC65 RNA-binding signal recognition particle subunit SEC65 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854866, updated on 8-Apr-2018
Gene symbol
SEC65
Gene description
RNA-binding signal recognition particle subunit SEC65
Primary source
SGD:S000004573
Locus tag
YML105C
Gene type
protein coding
RNA name
RNA-binding signal recognition particle subunit SEC65
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (57866..58687, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Pml39p Neighboring gene orotate phosphoribosyltransferase URA5 Neighboring gene Mdm1p Neighboring gene Nup188p

  • Protein export, organism-specific biosystem (from KEGG)
    Protein export, organism-specific biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
  • Protein export, conserved biosystem (from KEGG)
    Protein export, conserved biosystemThe protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the ge...
Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
7S RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
7S RNA binding IDA
Inferred from Direct Assay
more info
PubMed 
7S RNA binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
signal recognition particle IEA
Inferred from Electronic Annotation
more info
 
signal recognition particle, endoplasmic reticulum targeting IBA
Inferred from Biological aspect of Ancestor
more info
 
signal recognition particle, endoplasmic reticulum targeting IDA
Inferred from Direct Assay
more info
PubMed 
signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 
signal recognition particle, endoplasmic reticulum targeting IMP
Inferred from Mutant Phenotype
more info
PubMed 
signal recognition particle, endoplasmic reticulum targeting ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Preferred Names
RNA-binding signal recognition particle subunit SEC65
NP_013602.1
  • Subunit of the signal recognition particle (SRP); involved in protein targeting to the ER; interacts with Srp54p; homolog of mammalian SRP19

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    57866..58687 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182467.1NP_013602.1  TPA: RNA-binding signal recognition particle subunit SEC65 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013602.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P29478
    Conserved Domains (1) summary
    pfam01922
    Location:100196
    SRP19; SRP19 protein
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