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URM1 ubiquitin-related modifier URM1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854809, updated on 5-Jun-2017
Gene symbol
URM1
Gene description
ubiquitin-related modifier URM1
Primary source
SGD:S000001270
Locus tag
YIL008W
Gene type
protein coding
RNA name
ubiquitin-related modifier URM1
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See URM1 in Map Viewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (342536..342835)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene long-chain fatty acid-CoA ligase FAA3 Neighboring gene Nas2p Neighboring gene NAD+ transporter

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Sulfur relay system, organism-specific biosystem (from KEGG)
    Sulfur relay system, organism-specific biosystemUbiquitin and ubiquitin-like proteins (Ubls) are signalling messengers that control many cellular functions, such as cell proliferation, apoptosis, and DNA repair. It is suggested that Ub-protein mod...
  • Sulfur relay system, conserved biosystem (from KEGG)
    Sulfur relay system, conserved biosystemUbiquitin and ubiquitin-like proteins (Ubls) are signalling messengers that control many cellular functions, such as cell proliferation, apoptosis, and DNA repair. It is suggested that Ub-protein mod...
Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
protein tag IDA
Inferred from Direct Assay
more info
PubMed 
protein tag IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
cell budding IGI
Inferred from Genetic Interaction
more info
PubMed 
cellular response to oxidative stress IDA
Inferred from Direct Assay
more info
PubMed 
cellular response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
invasive growth in response to glucose limitation IGI
Inferred from Genetic Interaction
more info
PubMed 
invasive growth in response to glucose limitation IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein urmylation IDA
Inferred from Direct Assay
more info
PubMed 
protein urmylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
tRNA processing IEA
Inferred from Electronic Annotation
more info
 
tRNA thio-modification IEA
Inferred from Electronic Annotation
more info
 
tRNA wobble position uridine thiolation IMP
Inferred from Mutant Phenotype
more info
PubMed 
tRNA wobble uridine modification IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
ubiquitin-related modifier URM1
NP_012258.3
  • Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs; receives sulfur from the E1-like enzyme Uba4p and transfers it to tRNA; also functions as a protein tag with roles in nutrient sensing and oxidative stress response

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    342536..342835
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179358.3NP_012258.3  TPA: ubiquitin-related modifier URM1 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012258.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P40554
    Conserved Domains (1) summary
    cd01764
    Location:499
    Urm1; Urm1-like ubuitin domain
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