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PAC1 Pac1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854443, updated on 9-Sep-2018

Summary

Gene symbol
PAC1
Gene description
Pac1p
Primary source
SGD:S000005795
Locus tag
YOR269W
Gene type
protein coding
RNA name
Pac1p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces

Genomic context

See PAC1 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (826385..827869)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene putative serine/threonine protein kinase HRK1 Neighboring gene hypothetical protein Neighboring gene H(+)-transporting V0 sector ATPase subunit a Neighboring gene Fsf1p

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
dynein complex binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule plus-end binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule plus-end binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
cell cycle IEA
Inferred from Electronic Annotation
more info
 
cell division IEA
Inferred from Electronic Annotation
more info
 
establishment of mitotic spindle orientation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule organizing center organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear migration IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear migration along microtubule IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of ATP-dependent microtubule motor activity, plus-end-directed IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of microtubule plus-end binding IDA
Inferred from Direct Assay
more info
PubMed 
regulation of microtubule motor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
vesicle transport along microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm HDA PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasmic microtubule IDA
Inferred from Direct Assay
more info
PubMed 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
kinetochore IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule IEA
Inferred from Electronic Annotation
more info
 
microtubule associated complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear envelope IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
spindle pole IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Pac1p
NP_014912.1
  • Involved in nuclear migration, part of the dynein/dynactin pathway; targets dynein to microtubule tips, which is necessary for sliding of microtubules along bud cortex; serves at interface between dynein's ATPase site and its microtubule binding stalk, causing individual dynein motors to remain attached to microtubules for long periods; synthetic lethal with bni1; homolog of human LIS1, mutations in which cause the severe brain disorder lissencephaly

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    826385..827869
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183688.1NP_014912.1  TPA: Pac1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014912.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P39946
    Conserved Domains (3) summary
    COG2319
    Location:138475
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:155492
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:158196
    7WD40; WD40 repeat [structural motif]
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