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GLN4 glutamine--tRNA ligase [ Saccharomyces cerevisiae S288C ]

Gene ID: 854339, updated on 9-Sep-2018

Summary

Gene symbol
GLN4
Gene description
glutamine--tRNA ligase
Primary source
SGD:S000005694
Locus tag
YOR168W
Gene type
protein coding
RNA name
glutamine--tRNA ligase
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces

Genomic context

See GLN4 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (649303..651732)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene mRNA-processing endoribonuclease Neighboring gene ribosomal 40S subunit protein S28A Neighboring gene sphinganine kinase LCB4 Neighboring gene Yrm1p

Bibliography

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the GLN4 gene: The GLN4 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by GO

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
glutamine-tRNA ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glutamine-tRNA ligase activity IDA
Inferred from Direct Assay
more info
PubMed 
glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
ligase activity IEA
Inferred from Electronic Annotation
more info
 
mRNA binding HDA PubMed 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cellular response to farnesol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glutaminyl-tRNA aminoacylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 
glutaminyl-tRNA aminoacylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 
tRNA aminoacylation for protein translation IEA
Inferred from Electronic Annotation
more info
 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
glutamine--tRNA ligase
NP_014811.3
  • Glutamine tRNA synthetase; monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Gln); N-terminal domain proposed to be involved in enzyme-tRNA interactions

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    649303..651732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183587.3NP_014811.3  TPA: glutamine--tRNA ligase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014811.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P13188
    Conserved Domains (3) summary
    TIGR00440
    Location:252807
    glnS; glutaminyl-tRNA synthetase
    pfam04557
    Location:166243
    tRNA_synt_1c_R2; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 2
    pfam04558
    Location:11163
    tRNA_synt_1c_R1; Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1
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