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VAM10 Vam10p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854234, updated on 9-Dec-2024

Summary

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Official Symbol
VAM10
Official Full Name
Vam10p
Primary source
SGD:S000005594
Locus tag
YOR068C
See related
AllianceGenome:SGD:S000005594; FungiDB:YOR068C; VEuPathDB:YOR068C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in vacuole fusion, non-autophagic. Predicted to be located in fungal-type vacuole membrane. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

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See VAM10 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (453869..454213, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Msa1p Neighboring gene dolichyl-P-Glc:Glc1Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase Neighboring gene sorting nexin 1 Neighboring gene GTPase-activating protein GYP1 Neighboring gene nicotinamide riboside transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Vam10p defines a Sec18p-independent step of priming that allows yeast vacuole tethering. Kato M, et al. Proc Natl Acad Sci U S A, 2003 May 27. PMID 12748377, Free PMC Article
  2. Synthetic dosage lethal (SDL) interaction data of Hmt1 arginine methyltransferase. Kyriakou D, et al. Data Brief, 2020 Aug. PMID 32637492, Free PMC Article
  3. Identification of mitogen-activated protein kinase signaling pathways that confer resistance to endoplasmic reticulum stress in Saccharomyces cerevisiae. Chen Y, et al. Mol Cancer Res, 2005 Dec. PMID 16380504
  4. A Genome-Wide Screen with Nicotinamide to Identify Sirtuin-Dependent Pathways in Saccharomyces cerevisiae. Choy JS, et al. G3 (Bethesda), 2015 Dec 8. PMID 26646153, Free PMC Article
  5. Modulation of Ubc4p/Ubc5p-mediated stress responses by the RING-finger-dependent ubiquitin-protein ligase Not4p in Saccharomyces cerevisiae. Mulder KW, et al. Genetics, 2007 May. PMID 17513889, Free PMC Article

See all (38) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in vacuole fusion, non-autophagic IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in fungal-type vacuole membrane IC
Inferred by Curator
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Vam10p
NP_014711.1
  • Protein involved in vacuole morphogenesis; acts at an early step of homotypic vacuole fusion that is required for vacuole tethering

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    453869..454213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183487.1 → NP_014711.1  TPA: Vam10p [Saccharomyces cerevisiae S288C]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W2D2, O00027, Q08474
    UniProtKB/TrEMBL
    A6ZNS1, B3LJB8, C7GX50, C8ZI30, G2WMU7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08474.1

Gene LinkOut

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